Carnation DB

Dca41419.1

Annotation

5-exons
f-1
sp|B9N2Z5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_670618#GO:0016020;GO:0048193#0F1P1C
sp|G7JVG6_MEDTR#Syntaxin family protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g128220#GO:0016020;GO:0048193#0F1P1C
Repeat List (scaffold4597)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41419.1	1	250	310	39.03	250	47	2e-57
Target_name	Start	End	Length	Cov(%)
sp\|B9N2Z5_POPTR	1	263	290	90.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41419.1	1	252	310	39.35	252	47	2e-53
Target_name	Start	End	Length	Cov(%)
AT4G30240.1	1	248	300	82.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4597	Augustus	mRNA	27178	29931	.	+	.	ID=Dca41419.1;Parent=Dca41419
scaffold4597	Augustus	exon	27178	27260	.	+	.	ID=Dca41419.1.exon1;Parent=Dca41419.1
scaffold4597	Augustus	exon	28566	28680	.	+	.	ID=Dca41419.1.exon2;Parent=Dca41419.1
scaffold4597	Augustus	exon	28853	29455	.	+	.	ID=Dca41419.1.exon3;Parent=Dca41419.1
scaffold4597	Augustus	exon	29676	29787	.	+	.	ID=Dca41419.1.exon4;Parent=Dca41419.1
scaffold4597	Augustus	exon	29912	29931	.	+	.	ID=Dca41419.1.exon5;Parent=Dca41419.1