Carnation DB

Dca41440.1

Annotation

5-exons
f-1
sp|B9SBD0_RICCO#Arginine/serine-rich splicing factor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0715980#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold46)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41440.1	2	241	250	67.2	240	70	2e-86
Target_name	Start	End	Length	Cov(%)
sp\|B9SBD0_RICCO	3	228	259	87.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41440.1	1	249	250	70.4	249	65	7e-85
Target_name	Start	End	Length	Cov(%)
AT3G61860.1	1	263	264	99.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold46	Augustus	mRNA	170155	173265	.	+	.	ID=Dca41440.1;Parent=Dca41440
scaffold46	Augustus	exon	170155	170260	.	+	.	ID=Dca41440.1.exon1;Parent=Dca41440.1
scaffold46	Augus-PASA	exon	171889	172001	.	+	.	ID=Dca41440.1.exon2;Parent=Dca41440.1
scaffold46	Augus-PASA	exon	172540	172766	.	+	.	ID=Dca41440.1.exon3;Parent=Dca41440.1
scaffold46	Augus-PASA	exon	172867	173142	.	+	.	ID=Dca41440.1.exon4;Parent=Dca41440.1
scaffold46	Augus-PASA	exon	173235	173265	.	+	.	ID=Dca41440.1.exon5;Parent=Dca41440.1