Dca41496.1
Annotation
- 2-exons
- f-1
- sp|A5C6U7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_004899#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
- sp|Q2QTB6_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g20210#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold4601)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41496.1 |
358 |
678 |
678 |
22.27 |
321 |
48 |
6e-93
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5C6U7_VITVI |
1034 |
1354 |
2452 |
13.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41496.1 |
68 |
351 |
678 |
14.45 |
284 |
35 |
5e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
546 |
821 |
1539 |
17.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4601 |
Augustus |
mRNA |
593 |
3537 |
. |
- |
. |
ID=Dca41496.1;Parent=Dca41496 |
| scaffold4601 |
Augustus |
exon |
593 |
1573 |
. |
- |
. |
ID=Dca41496.1.exon1;Parent=Dca41496.1 |
| scaffold4601 |
Augustus |
exon |
2482 |
3537 |
. |
- |
. |
ID=Dca41496.1.exon2;Parent=Dca41496.1 |
