Dca41505.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4605)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41505.1 |
25 |
201 |
214 |
36.44 |
177 |
45 |
8e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
23 |
198 |
1501 |
11.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41505.1 |
38 |
210 |
214 |
24.29 |
173 |
31 |
4e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
251 |
296 |
58.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4605 |
Augustus |
mRNA |
527 |
1249 |
. |
- |
. |
ID=Dca41505.1;Parent=Dca41505 |
| scaffold4605 |
Augustus |
exon |
527 |
942 |
. |
- |
. |
ID=Dca41505.1.exon1;Parent=Dca41505.1 |
| scaffold4605 |
Augustus |
exon |
1022 |
1249 |
. |
- |
. |
ID=Dca41505.1.exon2;Parent=Dca41505.1 |
