Carnation DB

Dca41534.1

Annotation

12-exons
f-1
sp|D7TEP2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0059g02490#GO:0016021#0F0P1C
sp|G7IKL2_MEDTR#Xenotropic and polytropic retrovirus receptor#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_2g088870#GO:0016021;GO:0004872#1F0P1C
Repeat List (scaffold461)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41534.1	4	439	439	79.49	436	74	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TEP2_VITVI	1	472	472	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41534.1	4	434	439	72.66	431	69	2e-178
Target_name	Start	End	Length	Cov(%)
AT5G35730.1	1	451	457	98.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold461	Augustus	mRNA	100548	107576	.	+	.	ID=Dca41534.1;Parent=Dca41534
scaffold461	Augustus	exon	100548	100626	.	+	.	ID=Dca41534.1.exon1;Parent=Dca41534.1
scaffold461	Augustus	exon	101589	101710	.	+	.	ID=Dca41534.1.exon2;Parent=Dca41534.1
scaffold461	Augustus	exon	102082	102174	.	+	.	ID=Dca41534.1.exon3;Parent=Dca41534.1
scaffold461	Augustus	exon	102316	102384	.	+	.	ID=Dca41534.1.exon4;Parent=Dca41534.1
scaffold461	Augustus	exon	102542	102637	.	+	.	ID=Dca41534.1.exon5;Parent=Dca41534.1
scaffold461	Augustus	exon	103777	103890	.	+	.	ID=Dca41534.1.exon6;Parent=Dca41534.1
scaffold461	Augustus	exon	104883	104936	.	+	.	ID=Dca41534.1.exon7;Parent=Dca41534.1
scaffold461	Augustus	exon	105025	105072	.	+	.	ID=Dca41534.1.exon8;Parent=Dca41534.1
scaffold461	Augustus	exon	106003	106153	.	+	.	ID=Dca41534.1.exon9;Parent=Dca41534.1
scaffold461	Augustus	exon	106339	106504	.	+	.	ID=Dca41534.1.exon10;Parent=Dca41534.1
scaffold461	Augustus	exon	106720	106789	.	+	.	ID=Dca41534.1.exon11;Parent=Dca41534.1
scaffold461	Augustus	exon	107319	107576	.	+	.	ID=Dca41534.1.exon12;Parent=Dca41534.1