Carnation DB

Dca4160.1

Annotation

5-exons
f-1
sp|B9S919_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0837850#GO:0016020#0F0P1C
AT1G69450.1 | Symbols: | Early-responsive to dehydration stress protein (ERD4) | chr1:26107120-26110006 REVERSE LENGTH=711
Repeat List (scaffold1153)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4160.1	2	427	428	65.42	426	66	2e-164
Target_name	Start	End	Length	Cov(%)
sp\|B9S919_RICCO	297	708	710	58.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4160.1	2	426	428	57.24	425	58	6e-147
Target_name	Start	End	Length	Cov(%)
AT1G69450.1	293	707	711	58.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1153	Augus-PASA	mRNA	28150	30951	.	-	.	ID=Dca4160.1;Parent=Dca4160
scaffold1153	Augus-PASA	exon	28150	28329	.	-	.	ID=Dca4160.1.exon1;Parent=Dca4160.1
scaffold1153	Augus-PASA	exon	28773	29006	.	-	.	ID=Dca4160.1.exon2;Parent=Dca4160.1
scaffold1153	Augus-PASA	exon	29612	29902	.	-	.	ID=Dca4160.1.exon3;Parent=Dca4160.1
scaffold1153	Augus-PASA	exon	30021	30297	.	-	.	ID=Dca4160.1.exon4;Parent=Dca4160.1
scaffold1153	Augus-PASA	exon	30647	30951	.	-	.	ID=Dca4160.1.exon5;Parent=Dca4160.1