Carnation DB

Dca41603.1

Annotation

20-exons
f-187
sp|D7U2L2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g01790#GO:0003824#1F0P0C
AT2G47240.1 | Symbols: CER8, LACS1 | AMP-dependent synthetase and ligase family protein | chr2:19393835-19397616 FORWARD LENGTH=660
Repeat List (scaffold462)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41603.1	1	659	660	70.3	659	71	0
Target_name	Start	End	Length	Cov(%)
sp\|D7U2L2_VITVI	1	659	662	99.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41603.1	1	659	660	65	659	66	0
Target_name	Start	End	Length	Cov(%)
AT2G47240.1	1	659	660	99.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold462	Augus-PASA	mRNA	110710	115389	.	-	.	ID=Dca41603.1;Parent=Dca41603
scaffold462	Augus-PASA	exon	110710	110757	.	-	.	ID=Dca41603.1.exon1;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	110839	110958	.	-	.	ID=Dca41603.1.exon2;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	111036	111218	.	-	.	ID=Dca41603.1.exon3;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	111300	111439	.	-	.	ID=Dca41603.1.exon4;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	111535	111780	.	-	.	ID=Dca41603.1.exon5;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	111878	111995	.	-	.	ID=Dca41603.1.exon6;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	112109	112184	.	-	.	ID=Dca41603.1.exon7;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	112273	112339	.	-	.	ID=Dca41603.1.exon8;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	112464	112551	.	-	.	ID=Dca41603.1.exon9;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	112687	112797	.	-	.	ID=Dca41603.1.exon10;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	113006	113173	.	-	.	ID=Dca41603.1.exon11;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	113266	113360	.	-	.	ID=Dca41603.1.exon12;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	113456	113495	.	-	.	ID=Dca41603.1.exon13;Parent=Dca41603.1
scaffold462	Augustus	exon	113594	113670	.	-	.	ID=Dca41603.1.exon14;Parent=Dca41603.1
scaffold462	Augustus	exon	113782	113830	.	-	.	ID=Dca41603.1.exon15;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	113905	113961	.	-	.	ID=Dca41603.1.exon16;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	114053	114142	.	-	.	ID=Dca41603.1.exon17;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	114560	114623	.	-	.	ID=Dca41603.1.exon18;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	114738	114908	.	-	.	ID=Dca41603.1.exon19;Parent=Dca41603.1
scaffold462	Augus-PASA	exon	115229	115389	.	-	.	ID=Dca41603.1.exon20;Parent=Dca41603.1