Dca4161.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold1153)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4161.1 |
62 |
763 |
825 |
42.66 |
702 |
46 |
8e-169
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
9 |
750 |
1717 |
43.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4161.1 |
548 |
640 |
825 |
4.24 |
93 |
38 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1153 |
Augustus |
mRNA |
60800 |
63448 |
. |
- |
. |
ID=Dca4161.1;Parent=Dca4161 |
| scaffold1153 |
Augustus |
exon |
60800 |
61795 |
. |
- |
. |
ID=Dca4161.1.exon1;Parent=Dca4161.1 |
| scaffold1153 |
Augustus |
exon |
61867 |
62826 |
. |
- |
. |
ID=Dca4161.1.exon2;Parent=Dca4161.1 |
| scaffold1153 |
Augustus |
exon |
62927 |
63448 |
. |
- |
. |
ID=Dca4161.1.exon3;Parent=Dca4161.1 |
