Dca4170.1
Annotation
- 3-exons
- f-2
- sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold11538)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4170.1 |
3 |
706 |
1451 |
18.4 |
704 |
38 |
8e-136
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG3_BETVU |
407 |
1105 |
1114 |
62.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4170.1 |
37 |
481 |
1451 |
10.33 |
445 |
33 |
7e-66
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
349 |
811 |
857 |
54.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11538 |
Augustus |
mRNA |
1 |
6170 |
. |
+ |
. |
ID=Dca4170.1;Parent=Dca4170 |
| scaffold11538 |
Augustus |
exon |
1 |
2129 |
. |
+ |
. |
ID=Dca4170.1.exon1;Parent=Dca4170.1 |
| scaffold11538 |
Augustus |
exon |
3846 |
4709 |
. |
+ |
. |
ID=Dca4170.1.exon2;Parent=Dca4170.1 |
| scaffold11538 |
Augustus |
exon |
4807 |
6170 |
. |
+ |
. |
ID=Dca4170.1.exon3;Parent=Dca4170.1 |
