Dca41720.1
Annotation
- 3-exons
- f-1
- sp|A5B7P8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_039222#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- sp|O22175_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g23330#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4641)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41720.1 |
4 |
146 |
409 |
17.11 |
143 |
49 |
3e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B7P8_VITVI |
1044 |
1173 |
1193 |
10.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41720.1 |
1 |
204 |
409 |
22 |
204 |
36 |
8e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
102 |
349 |
1262 |
19.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4641 |
Augustus |
mRNA |
17712 |
19780 |
. |
+ |
. |
ID=Dca41720.1;Parent=Dca41720 |
| scaffold4641 |
Augustus |
exon |
17712 |
18147 |
. |
+ |
. |
ID=Dca41720.1.exon1;Parent=Dca41720.1 |
| scaffold4641 |
Augustus |
exon |
18307 |
18465 |
. |
+ |
. |
ID=Dca41720.1.exon2;Parent=Dca41720.1 |
| scaffold4641 |
Augustus |
exon |
19146 |
19780 |
. |
+ |
. |
ID=Dca41720.1.exon3;Parent=Dca41720.1 |
