Carnation DB

Dca4184.1

Annotation

6-exons
f-1
sp|B9RI44_RICCO#Ribonucleic acid binding protein S1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1576190#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold11544)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4184.1	38	130	178	38.2	93	72	5e-32
Target_name	Start	End	Length	Cov(%)
sp\|B9RI44_RICCO	78	172	423	22.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4184.1	44	130	178	32.58	87	56	2e-26
Target_name	Start	End	Length	Cov(%)
Os01t0959000-01	65	169	433	24.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11544	Augustus	mRNA	1648	7184	.	-	.	ID=Dca4184.1;Parent=Dca4184
scaffold11544	Augustus	exon	1648	1791	.	-	.	ID=Dca4184.1.exon1;Parent=Dca4184.1
scaffold11544	Augustus	exon	4968	5048	.	-	.	ID=Dca4184.1.exon2;Parent=Dca4184.1
scaffold11544	Augustus	exon	5145	5191	.	-	.	ID=Dca4184.1.exon3;Parent=Dca4184.1
scaffold11544	Augustus	exon	5669	5754	.	-	.	ID=Dca4184.1.exon4;Parent=Dca4184.1
scaffold11544	Augustus	exon	6305	6370	.	-	.	ID=Dca4184.1.exon5;Parent=Dca4184.1
scaffold11544	Augustus	exon	7072	7184	.	-	.	ID=Dca4184.1.exon6;Parent=Dca4184.1