Carnation DB

Dca41849.1

Annotation

8-exons
f-1
sp|B9IHF2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1102736#GO:0020037#1F0P0C
AT4G14965.1 | Symbols: AtMAPR4, MAPR4 | membrane-associated progesterone binding protein 4 | chr4:8551356-8553368 FORWARD LENGTH=245
Repeat List (scaffold467)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41849.1	7	239	239	69.87	233	71	8e-98
Target_name	Start	End	Length	Cov(%)
sp\|B9IHF2_POPTR	14	250	250	94.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41849.1	7	239	239	68.61	233	70	3e-96
Target_name	Start	End	Length	Cov(%)
AT4G14965.1	12	245	245	95.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold467	Augus-PASA	mRNA	55173	59735	.	+	.	ID=Dca41849.1;Parent=Dca41849
scaffold467	Augus-PASA	exon	55173	55271	.	+	.	ID=Dca41849.1.exon1;Parent=Dca41849.1
scaffold467	Augus-PASA	exon	55467	55543	.	+	.	ID=Dca41849.1.exon2;Parent=Dca41849.1
scaffold467	Augus-PASA	exon	55833	55904	.	+	.	ID=Dca41849.1.exon3;Parent=Dca41849.1
scaffold467	Augus-PASA	exon	57180	57217	.	+	.	ID=Dca41849.1.exon4;Parent=Dca41849.1
scaffold467	Augus-PASA	exon	58362	58405	.	+	.	ID=Dca41849.1.exon5;Parent=Dca41849.1
scaffold467	Augus-PASA	exon	58646	58692	.	+	.	ID=Dca41849.1.exon6;Parent=Dca41849.1
scaffold467	Augus-PASA	exon	59096	59270	.	+	.	ID=Dca41849.1.exon7;Parent=Dca41849.1
scaffold467	Augus-PASA	exon	59568	59735	.	+	.	ID=Dca41849.1.exon8;Parent=Dca41849.1