Carnation DB

Dca41890.1

Annotation

24-exons
f-1
sp|F6HIV0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0047g00510#GO:0005694;GO:0005524;GO:0003918;GO:0006265#2F1P1C
Os03t0812000-01 DNA topoisomerase, type IIA, subunit A or C-terminal domain containing protein.
Repeat List (scaffold4678)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41890.1	2	770	780	71.28	769	68	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HIV0_VITVI	51	825	832	93.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41890.1	2	769	780	67.43	768	65	0
Target_name	Start	End	Length	Cov(%)
AT3G10690.1	165	937	950	81.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4678	Augustus	mRNA	29306	44759	.	-	.	ID=Dca41890.1;Parent=Dca41890
scaffold4678	Augustus	exon	29306	29426	.	-	.	ID=Dca41890.1.exon1;Parent=Dca41890.1
scaffold4678	Augustus	exon	30378	30477	.	-	.	ID=Dca41890.1.exon2;Parent=Dca41890.1
scaffold4678	Augustus	exon	30577	30631	.	-	.	ID=Dca41890.1.exon3;Parent=Dca41890.1
scaffold4678	Augustus	exon	30716	30836	.	-	.	ID=Dca41890.1.exon4;Parent=Dca41890.1
scaffold4678	Augustus	exon	31644	31780	.	-	.	ID=Dca41890.1.exon5;Parent=Dca41890.1
scaffold4678	Augustus	exon	32458	32559	.	-	.	ID=Dca41890.1.exon6;Parent=Dca41890.1
scaffold4678	Augustus	exon	32664	32828	.	-	.	ID=Dca41890.1.exon7;Parent=Dca41890.1
scaffold4678	Augustus	exon	33014	33095	.	-	.	ID=Dca41890.1.exon8;Parent=Dca41890.1
scaffold4678	Augustus	exon	34215	34372	.	-	.	ID=Dca41890.1.exon9;Parent=Dca41890.1
scaffold4678	Augustus	exon	34504	34587	.	-	.	ID=Dca41890.1.exon10;Parent=Dca41890.1
scaffold4678	Augustus	exon	36196	36285	.	-	.	ID=Dca41890.1.exon11;Parent=Dca41890.1
scaffold4678	Augustus	exon	36374	36444	.	-	.	ID=Dca41890.1.exon12;Parent=Dca41890.1
scaffold4678	Augustus	exon	37079	37172	.	-	.	ID=Dca41890.1.exon13;Parent=Dca41890.1
scaffold4678	Augustus	exon	37257	37343	.	-	.	ID=Dca41890.1.exon14;Parent=Dca41890.1
scaffold4678	Augustus	exon	38704	38793	.	-	.	ID=Dca41890.1.exon15;Parent=Dca41890.1
scaffold4678	Augustus	exon	40022	40084	.	-	.	ID=Dca41890.1.exon16;Parent=Dca41890.1
scaffold4678	Augustus	exon	40181	40302	.	-	.	ID=Dca41890.1.exon17;Parent=Dca41890.1
scaffold4678	Augustus	exon	41354	41414	.	-	.	ID=Dca41890.1.exon18;Parent=Dca41890.1
scaffold4678	Augustus	exon	42441	42528	.	-	.	ID=Dca41890.1.exon19;Parent=Dca41890.1
scaffold4678	Augustus	exon	42732	42865	.	-	.	ID=Dca41890.1.exon20;Parent=Dca41890.1
scaffold4678	Augustus	exon	42997	43095	.	-	.	ID=Dca41890.1.exon21;Parent=Dca41890.1
scaffold4678	Augustus	exon	43182	43226	.	-	.	ID=Dca41890.1.exon22;Parent=Dca41890.1
scaffold4678	Augustus	exon	44214	44315	.	-	.	ID=Dca41890.1.exon23;Parent=Dca41890.1
scaffold4678	Augustus	exon	44688	44759	.	-	.	ID=Dca41890.1.exon24;Parent=Dca41890.1