Dca41936.1
Annotation
- 2-exons
- f-1
- sp|Q9SJP0_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g15410#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4686)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41936.1 |
3 |
298 |
298 |
59.39 |
296 |
57 |
2e-105
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SJP0_ARATH |
718 |
1030 |
1787 |
17.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41936.1 |
96 |
295 |
298 |
22.14 |
200 |
33 |
5e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
635 |
830 |
1539 |
12.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4686 |
Augustus |
mRNA |
16448 |
17395 |
. |
+ |
. |
ID=Dca41936.1;Parent=Dca41936 |
| scaffold4686 |
Augustus |
exon |
16448 |
16732 |
. |
+ |
. |
ID=Dca41936.1.exon1;Parent=Dca41936.1 |
| scaffold4686 |
Augustus |
exon |
16784 |
17395 |
. |
+ |
. |
ID=Dca41936.1.exon2;Parent=Dca41936.1 |
