Carnation DB

Dca42008.1

Annotation

4-exons
f-1
sp|B9MTH2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_826451#unknown#0F0P0C
Repeat List (scaffold47)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42008.1	1	124	124	70.96	124	70	2e-48
Target_name	Start	End	Length	Cov(%)
sp\|B9MTH2_POPTR	1	126	126	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42008.1	1	124	124	66.93	124	67	1e-47
Target_name	Start	End	Length	Cov(%)
AT2G36835.1	1	124	124	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold47	Augus-PASA	mRNA	22065	24533	.	+	.	ID=Dca42008.1;Parent=Dca42008
scaffold47	Augus-PASA	exon	22065	22208	.	+	.	ID=Dca42008.1.exon1;Parent=Dca42008.1
scaffold47	Augus-PASA	exon	22724	22834	.	+	.	ID=Dca42008.1.exon2;Parent=Dca42008.1
scaffold47	Augus-PASA	exon	23825	23893	.	+	.	ID=Dca42008.1.exon3;Parent=Dca42008.1
scaffold47	Augus-PASA	exon	24483	24533	.	+	.	ID=Dca42008.1.exon4;Parent=Dca42008.1
scaffold47	Augus-PASA	mRNA	22065	24533	.	+	.	ID=Dca42008.2;Parent=Dca42008
scaffold47	Augus-PASA	exon	22065	22208	.	+	.	ID=Dca42008.2.exon1;Parent=Dca42008.2
scaffold47	Augus-PASA	exon	22724	22834	.	+	.	ID=Dca42008.2.exon2;Parent=Dca42008.2
scaffold47	Augus-PASA	exon	24483	24533	.	+	.	ID=Dca42008.2.exon3;Parent=Dca42008.2