Dca42112.1
Annotation
- 4-exons
- f-1
- sp|D7MFU1_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_491288#GO:0016021#0F0P1C
- AT4G33905.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | chr4:16254065-16255592 REVERSE LENGTH=261
- Repeat List (scaffold471)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42112.1 |
27 |
203 |
205 |
66.34 |
177 |
77 |
4e-80
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7MFU1_ARALL |
78 |
254 |
259 |
68.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42112.1 |
25 |
203 |
205 |
64.39 |
179 |
74 |
4e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G33905.1 |
78 |
256 |
261 |
68.58 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold471 |
Augustus |
mRNA |
81071 |
82654 |
. |
+ |
. |
ID=Dca42112.1;Parent=Dca42112 |
| scaffold471 |
Augustus |
exon |
81071 |
81253 |
. |
+ |
. |
ID=Dca42112.1.exon1;Parent=Dca42112.1 |
| scaffold471 |
Augustus |
exon |
81336 |
81564 |
. |
+ |
. |
ID=Dca42112.1.exon2;Parent=Dca42112.1 |
| scaffold471 |
Augustus |
exon |
82211 |
82335 |
. |
+ |
. |
ID=Dca42112.1.exon3;Parent=Dca42112.1 |
| scaffold471 |
Augustus |
exon |
82574 |
82654 |
. |
+ |
. |
ID=Dca42112.1.exon4;Parent=Dca42112.1 |
