Carnation DB

Dca42141.1

Annotation

8-exons
f-1
sp|D7U5T4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0045g01250#GO:0005488;GO:0016779;GO:0009058;GO:0016070#2F2P0C
AT2G34970.1 | Symbols: | Trimeric LpxA-like enzyme | chr2:14746340-14748532 FORWARD LENGTH=730
Repeat List (scaffold4715)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42141.1	45	201	206	53.88	157	70	5e-57
Target_name	Start	End	Length	Cov(%)
sp\|D7U5T4_VITVI	571	729	730	21.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42141.1	45	198	206	46.11	154	61	2e-50
Target_name	Start	End	Length	Cov(%)
AT2G34970.1	559	714	730	21.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4715	Augus-PASA	mRNA	14465	16879	.	-	.	ID=Dca42141.1;Parent=Dca42141
scaffold4715	Augus-PASA	exon	14465	14509	.	-	.	ID=Dca42141.1.exon1;Parent=Dca42141.1
scaffold4715	Augus-PASA	exon	14615	14740	.	-	.	ID=Dca42141.1.exon2;Parent=Dca42141.1
scaffold4715	Augus-PASA	exon	14872	14943	.	-	.	ID=Dca42141.1.exon3;Parent=Dca42141.1
scaffold4715	Augus-PASA	exon	15130	15212	.	-	.	ID=Dca42141.1.exon4;Parent=Dca42141.1
scaffold4715	Augus-PASA	exon	15354	15445	.	-	.	ID=Dca42141.1.exon5;Parent=Dca42141.1
scaffold4715	Augus-PASA	exon	15613	15682	.	-	.	ID=Dca42141.1.exon6;Parent=Dca42141.1
scaffold4715	Augustus	exon	15809	15890	.	-	.	ID=Dca42141.1.exon7;Parent=Dca42141.1
scaffold4715	Augustus	exon	16829	16879	.	-	.	ID=Dca42141.1.exon8;Parent=Dca42141.1