Carnation DB

Dca42254.1

Annotation

6-exons
f-1
sp|D7T787_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g04700#unknown#0F0P0C
Repeat List (scaffold4737)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42254.1	1	250	253	56.12	250	57	5e-69
Target_name	Start	End	Length	Cov(%)
sp\|D7T787_VITVI	1	222	234	94.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42254.1	1	252	253	41.1	252	42	3e-41
Target_name	Start	End	Length	Cov(%)
AT5G43680.1	1	219	232	94.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4737	Augustus	mRNA	15367	17300	.	+	.	ID=Dca42254.1;Parent=Dca42254
scaffold4737	Augustus	exon	15367	15427	.	+	.	ID=Dca42254.1.exon1;Parent=Dca42254.1
scaffold4737	Augus-PASA	exon	15501	15622	.	+	.	ID=Dca42254.1.exon2;Parent=Dca42254.1
scaffold4737	Augus-PASA	exon	16011	16149	.	+	.	ID=Dca42254.1.exon3;Parent=Dca42254.1
scaffold4737	Augus-PASA	exon	16237	16367	.	+	.	ID=Dca42254.1.exon4;Parent=Dca42254.1
scaffold4737	Augus-PASA	exon	16878	17076	.	+	.	ID=Dca42254.1.exon5;Parent=Dca42254.1
scaffold4737	Augustus	exon	17191	17300	.	+	.	ID=Dca42254.1.exon6;Parent=Dca42254.1