Dca42316.1
Annotation
- 3-exons
- f-1
- sp|A5B919_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002640#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold475)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42316.1 |
1 |
1383 |
1383 |
54.22 |
1383 |
50 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B919_VITVI |
1 |
1450 |
1450 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42316.1 |
341 |
1373 |
1383 |
25.59 |
1033 |
33 |
1e-145
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
377 |
1389 |
1401 |
72.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold475 |
Augustus |
mRNA |
44176 |
48576 |
. |
- |
. |
ID=Dca42316.1;Parent=Dca42316 |
| scaffold475 |
Augustus |
exon |
44176 |
44692 |
. |
- |
. |
ID=Dca42316.1.exon1;Parent=Dca42316.1 |
| scaffold475 |
Augustus |
exon |
44832 |
47676 |
. |
- |
. |
ID=Dca42316.1.exon2;Parent=Dca42316.1 |
| scaffold475 |
Augustus |
exon |
47787 |
48576 |
. |
- |
. |
ID=Dca42316.1.exon3;Parent=Dca42316.1 |
