Dca42360.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7Y1N4_ORYSJ#Putative retrotransposon gag protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0053G10.17#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold4759)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42360.1 |
298 |
506 |
524 |
16.41 |
209 |
40 |
5e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
380 |
556 |
1717 |
10.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42360.1 |
454 |
505 |
524 |
4.58 |
52 |
47 |
1e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0122300-01 |
77 |
127 |
150 |
34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4759 |
Augustus |
mRNA |
12168 |
14165 |
. |
+ |
. |
ID=Dca42360.1;Parent=Dca42360 |
| scaffold4759 |
Augustus |
exon |
12168 |
13185 |
. |
+ |
. |
ID=Dca42360.1.exon1;Parent=Dca42360.1 |
| scaffold4759 |
Augustus |
exon |
13609 |
14165 |
. |
+ |
. |
ID=Dca42360.1.exon2;Parent=Dca42360.1 |
