Carnation DB

Dca424.1

Annotation

7-exons
f-1
sp|F6GW60_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0061g01160#unknown#0F0P0C
AT5G22790.1 | Symbols: RER1 | reticulata-related 1 | chr5:7599395-7601573 REVERSE LENGTH=433
Repeat List (scaffold1006)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca424.1	121	412	412	57.76	292	82	1e-142
Target_name	Start	End	Length	Cov(%)
sp\|F6GW60_VITVI	120	409	409	70.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca424.1	119	412	412	55.58	294	78	1e-137
Target_name	Start	End	Length	Cov(%)
AT5G22790.1	141	433	433	67.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1006	Augus-PASA	mRNA	41522	45061	.	+	.	ID=Dca424.1;Parent=Dca424
scaffold1006	Augus-PASA	exon	41522	42025	.	+	.	ID=Dca424.1.exon1;Parent=Dca424.1
scaffold1006	Augus-PASA	exon	42334	42432	.	+	.	ID=Dca424.1.exon2;Parent=Dca424.1
scaffold1006	Augus-PASA	exon	42649	42875	.	+	.	ID=Dca424.1.exon3;Parent=Dca424.1
scaffold1006	Augus-PASA	exon	43309	43378	.	+	.	ID=Dca424.1.exon4;Parent=Dca424.1
scaffold1006	Augus-PASA	exon	44024	44103	.	+	.	ID=Dca424.1.exon5;Parent=Dca424.1
scaffold1006	Augus-PASA	exon	44597	44661	.	+	.	ID=Dca424.1.exon6;Parent=Dca424.1
scaffold1006	Augus-PASA	exon	44868	45061	.	+	.	ID=Dca424.1.exon7;Parent=Dca424.1