Dca42474.1
Annotation
- 2-exons
- f-2
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4779)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42474.1 |
47 |
313 |
630 |
13.8 |
267 |
32 |
1e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
23 |
281 |
896 |
28.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42474.1 |
323 |
609 |
630 |
15.39 |
287 |
34 |
6e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1103 |
1378 |
1401 |
19.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4779 |
Augustus |
mRNA |
141 |
4091 |
. |
+ |
. |
ID=Dca42474.1;Parent=Dca42474 |
| scaffold4779 |
Augustus |
exon |
141 |
1102 |
. |
+ |
. |
ID=Dca42474.1.exon1;Parent=Dca42474.1 |
| scaffold4779 |
Augustus |
exon |
3160 |
4091 |
. |
+ |
. |
ID=Dca42474.1.exon2;Parent=Dca42474.1 |
