Dca42610.1
Annotation
- 4-exons
- f-1
- sp|F6I314_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0048g02030#GO:0008270#1F0P0C
- AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:22645680-22647290 FORWARD LENGTH=379
- Repeat List (scaffold48)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42610.1 |
6 |
352 |
370 |
57.56 |
347 |
62 |
3e-108
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6I314_VITVI |
2 |
324 |
382 |
84.55 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42610.1 |
42 |
352 |
370 |
45.94 |
311 |
55 |
5e-87
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G61180.1 |
38 |
321 |
379 |
74.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold48 |
Augus-PASA |
mRNA |
172238 |
175572 |
. |
+ |
. |
ID=Dca42610.1;Parent=Dca42610 |
| scaffold48 |
Augus-PASA |
exon |
172238 |
172875 |
. |
+ |
. |
ID=Dca42610.1.exon1;Parent=Dca42610.1 |
| scaffold48 |
Augus-PASA |
exon |
174878 |
174997 |
. |
+ |
. |
ID=Dca42610.1.exon2;Parent=Dca42610.1 |
| scaffold48 |
Augus-PASA |
exon |
175093 |
175225 |
. |
+ |
. |
ID=Dca42610.1.exon3;Parent=Dca42610.1 |
| scaffold48 |
Augustus |
exon |
175351 |
175572 |
. |
+ |
. |
ID=Dca42610.1.exon4;Parent=Dca42610.1 |
