Carnation DB

Dca42611.1

Annotation

11-exons
f-1
sp|B9IC92_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_572201#GO:0005525;GO:0017111;GO:0006614#2F1P0C
AT2G45770.2 | Symbols: CPFTSY | signal recognition particle receptor protein, chloroplast (FTSY) | chr2:18851248-18853402 FORWARD LENGTH=373
Repeat List (scaffold48)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42611.1	1	367	367	83.37	367	84	6e-172
Target_name	Start	End	Length	Cov(%)
sp\|B9IC92_POPTR	1	365	365	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42611.1	12	367	367	76.02	356	75	1e-157
Target_name	Start	End	Length	Cov(%)
AT2G45770.2	2	373	373	99.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold48	Augustus	mRNA	176952	181414	.	+	.	ID=Dca42611.1;Parent=Dca42611
scaffold48	Augustus	exon	176952	177260	.	+	.	ID=Dca42611.1.exon1;Parent=Dca42611.1
scaffold48	Augustus	exon	178141	178245	.	+	.	ID=Dca42611.1.exon2;Parent=Dca42611.1
scaffold48	Augustus	exon	179138	179211	.	+	.	ID=Dca42611.1.exon3;Parent=Dca42611.1
scaffold48	Augustus	exon	179323	179381	.	+	.	ID=Dca42611.1.exon4;Parent=Dca42611.1
scaffold48	Augustus	exon	179571	179608	.	+	.	ID=Dca42611.1.exon5;Parent=Dca42611.1
scaffold48	Augustus	exon	180265	180385	.	+	.	ID=Dca42611.1.exon6;Parent=Dca42611.1
scaffold48	Augustus	exon	180486	180554	.	+	.	ID=Dca42611.1.exon7;Parent=Dca42611.1
scaffold48	Augustus	exon	180636	180718	.	+	.	ID=Dca42611.1.exon8;Parent=Dca42611.1
scaffold48	Augustus	exon	180983	181051	.	+	.	ID=Dca42611.1.exon9;Parent=Dca42611.1
scaffold48	Augustus	exon	181155	181217	.	+	.	ID=Dca42611.1.exon10;Parent=Dca42611.1
scaffold48	Augustus	exon	181301	181414	.	+	.	ID=Dca42611.1.exon11;Parent=Dca42611.1