Carnation DB

Dca42643.1

Annotation

6-exons
f-1
sp|A5CBE5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g02470#unknown#0F0P0C
Repeat List (scaffold480)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42643.1	11	215	215	49.3	205	52	7e-53
Target_name	Start	End	Length	Cov(%)
sp\|A5CBE5_VITVI	49	248	252	79.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42643.1	9	189	215	37.67	181	45	6e-42
Target_name	Start	End	Length	Cov(%)
Os04t0585600-01	39	216	241	73.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold480	Augustus	mRNA	7635	8797	.	-	.	ID=Dca42643.1;Parent=Dca42643
scaffold480	Augustus	exon	7635	7772	.	-	.	ID=Dca42643.1.exon1;Parent=Dca42643.1
scaffold480	Augustus	exon	7864	7992	.	-	.	ID=Dca42643.1.exon2;Parent=Dca42643.1
scaffold480	Augustus	exon	8117	8192	.	-	.	ID=Dca42643.1.exon3;Parent=Dca42643.1
scaffold480	Augustus	exon	8284	8363	.	-	.	ID=Dca42643.1.exon4;Parent=Dca42643.1
scaffold480	Augustus	exon	8455	8641	.	-	.	ID=Dca42643.1.exon5;Parent=Dca42643.1
scaffold480	Augustus	exon	8760	8797	.	-	.	ID=Dca42643.1.exon6;Parent=Dca42643.1