Carnation DB

Dca42718.1

Annotation

7-exons
f-1
sp|A9PJQ9_9ROSI#Putative uncharacterized protein#Populus trichocarpa x Populus deltoides#unknown#GO:0000166#1F0P0C
Os01t0965600-01 Similar to growth inhibition and differentiation-related protein 88.
Repeat List (scaffold4810)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42718.1	3	370	373	51.74	368	53	3e-94
Target_name	Start	End	Length	Cov(%)
sp\|A9PJQ9_9ROSI	7	359	359	98.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42718.1	13	370	373	49.06	358	49	1e-85
Target_name	Start	End	Length	Cov(%)
AT5G22120.1	17	383	383	95.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4810	Augustus	mRNA	19930	23557	.	-	.	ID=Dca42718.1;Parent=Dca42718
scaffold4810	Augustus	exon	19930	20126	.	-	.	ID=Dca42718.1.exon1;Parent=Dca42718.1
scaffold4810	Augustus	exon	20692	20781	.	-	.	ID=Dca42718.1.exon2;Parent=Dca42718.1
scaffold4810	Augustus	exon	21293	21454	.	-	.	ID=Dca42718.1.exon3;Parent=Dca42718.1
scaffold4810	Augustus	exon	22070	22324	.	-	.	ID=Dca42718.1.exon4;Parent=Dca42718.1
scaffold4810	Augustus	exon	22928	22987	.	-	.	ID=Dca42718.1.exon5;Parent=Dca42718.1
scaffold4810	Augustus	exon	23088	23170	.	-	.	ID=Dca42718.1.exon6;Parent=Dca42718.1
scaffold4810	Augustus	exon	23283	23557	.	-	.	ID=Dca42718.1.exon7;Parent=Dca42718.1