Dca4275.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold11589)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4275.1 |
29 |
151 |
151 |
45.69 |
123 |
57 |
1e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
410 |
532 |
964 |
12.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4275.1 |
22 |
151 |
151 |
33.11 |
130 |
39 |
7e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
882 |
1002 |
1428 |
8.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11589 |
Augustus |
mRNA |
14324 |
15107 |
. |
+ |
. |
ID=Dca4275.1;Parent=Dca4275 |
| scaffold11589 |
Augustus |
exon |
14324 |
14415 |
. |
+ |
. |
ID=Dca4275.1.exon1;Parent=Dca4275.1 |
| scaffold11589 |
Augustus |
exon |
14744 |
15107 |
. |
+ |
. |
ID=Dca4275.1.exon2;Parent=Dca4275.1 |
