Carnation DB

Dca42829.1

Annotation

5-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold4833)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42829.1	1	585	821	46.52	585	62	0
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	904	1521	1553	39.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42829.1	1	584	821	22.89	584	31	5e-74
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	897	1475	1539	37.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4833	Augustus	mRNA	9304	16010	.	+	.	ID=Dca42829.1;Parent=Dca42829
scaffold4833	Augustus	exon	9304	9433	.	+	.	ID=Dca42829.1.exon1;Parent=Dca42829.1
scaffold4833	Augustus	exon	9524	11155	.	+	.	ID=Dca42829.1.exon2;Parent=Dca42829.1
scaffold4833	Augustus	exon	11444	11596	.	+	.	ID=Dca42829.1.exon3;Parent=Dca42829.1
scaffold4833	Augustus	exon	14147	14275	.	+	.	ID=Dca42829.1.exon4;Parent=Dca42829.1
scaffold4833	Augustus	exon	15589	16010	.	+	.	ID=Dca42829.1.exon5;Parent=Dca42829.1