Dca42877.1
Annotation
- 3-exons
- f-1
- sp|Q4W6T6_PETHY#Polypepetide with reverse transcriptase and RNaseH domains#Petunia hybrida (Petunia)#unknown#GO:0003964#1F0P0C
- Repeat List (scaffold4842)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42877.1 |
257 |
392 |
400 |
18.5 |
136 |
54 |
1e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q4W6T6_PETHY |
215 |
351 |
389 |
35.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42877.1 |
271 |
370 |
400 |
14 |
100 |
56 |
1e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
445 |
544 |
1262 |
7.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4842 |
Augustus |
mRNA |
4669 |
7549 |
. |
+ |
. |
ID=Dca42877.1;Parent=Dca42877 |
| scaffold4842 |
Augustus |
exon |
4669 |
5009 |
. |
+ |
. |
ID=Dca42877.1.exon1;Parent=Dca42877.1 |
| scaffold4842 |
Augustus |
exon |
5300 |
5766 |
. |
+ |
. |
ID=Dca42877.1.exon2;Parent=Dca42877.1 |
| scaffold4842 |
Augustus |
exon |
7155 |
7549 |
. |
+ |
. |
ID=Dca42877.1.exon3;Parent=Dca42877.1 |
