Carnation DB

Dca42951.1

Annotation

12-exons
f-1
sp|E0CRP5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g06390#unknown#0F0P0C
AT1G22460.1 | Symbols: | O-fucosyltransferase family protein | chr1:7927530-7930351 REVERSE LENGTH=565
Repeat List (scaffold486)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42951.1	1	529	529	73.72	529	73	0
Target_name	Start	End	Length	Cov(%)
sp\|E0CRP5_VITVI	1	535	536	99.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42951.1	17	516	529	62	500	61	0
Target_name	Start	End	Length	Cov(%)
AT1G22460.1	18	557	565	95.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold486	Augus-PASA	mRNA	71268	75463	.	+	.	ID=Dca42951.1;Parent=Dca42951
scaffold486	Augus-PASA	exon	71268	71411	.	+	.	ID=Dca42951.1.exon1;Parent=Dca42951.1
scaffold486	Augus-PASA	exon	72084	72182	.	+	.	ID=Dca42951.1.exon2;Parent=Dca42951.1
scaffold486	Augus-PASA	exon	72812	72911	.	+	.	ID=Dca42951.1.exon3;Parent=Dca42951.1
scaffold486	Augus-PASA	exon	73012	73079	.	+	.	ID=Dca42951.1.exon4;Parent=Dca42951.1
scaffold486	Augus-PASA	exon	73306	73394	.	+	.	ID=Dca42951.1.exon5;Parent=Dca42951.1
scaffold486	Augus-PASA	exon	73503	73683	.	+	.	ID=Dca42951.1.exon6;Parent=Dca42951.1
scaffold486	Augus-PASA	exon	73785	73913	.	+	.	ID=Dca42951.1.exon7;Parent=Dca42951.1
scaffold486	Augus-PASA	exon	74013	74146	.	+	.	ID=Dca42951.1.exon8;Parent=Dca42951.1
scaffold486	Augus-PASA	exon	74243	74456	.	+	.	ID=Dca42951.1.exon9;Parent=Dca42951.1
scaffold486	Augus-PASA	exon	74837	75021	.	+	.	ID=Dca42951.1.exon10;Parent=Dca42951.1
scaffold486	Augus-PASA	exon	75122	75217	.	+	.	ID=Dca42951.1.exon11;Parent=Dca42951.1
scaffold486	Augus-PASA	exon	75313	75463	.	+	.	ID=Dca42951.1.exon12;Parent=Dca42951.1