Carnation DB

Dca43.1

Annotation

8-exons
f-1
sp|E0CUJ3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0050g02560#GO:0016021;GO:0005216#1F0P1C
sp|Q9LM04_TOBAC#Cyclic nucleotide-gated calmodulin-binding ion channel#Nicotiana tabacum (Common tobacco)#Name=CBP4#GO:0016021;GO:0005216#1F0P1C
Repeat List (scaffold1)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43.1	12	658	659	60.39	647	55	0
Target_name	Start	End	Length	Cov(%)
sp\|E0CUJ3_VITVI	2	708	709	99.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43.1	16	658	659	50.22	643	46	1e-174
Target_name	Start	End	Length	Cov(%)
Os06t0527100-01	7	693	695	98.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1	Augustus	mRNA	441684	446230	.	-	.	ID=Dca43.1;Parent=Dca43
scaffold1	Augustus	exon	441684	441987	.	-	.	ID=Dca43.1.exon1;Parent=Dca43.1
scaffold1	Augustus	exon	442450	442787	.	-	.	ID=Dca43.1.exon2;Parent=Dca43.1
scaffold1	Augustus	exon	443147	443383	.	-	.	ID=Dca43.1.exon3;Parent=Dca43.1
scaffold1	Augustus	exon	443736	443847	.	-	.	ID=Dca43.1.exon4;Parent=Dca43.1
scaffold1	Augustus	exon	444286	444398	.	-	.	ID=Dca43.1.exon5;Parent=Dca43.1
scaffold1	Augustus	exon	444660	444869	.	-	.	ID=Dca43.1.exon6;Parent=Dca43.1
scaffold1	Augustus	exon	445378	445984	.	-	.	ID=Dca43.1.exon7;Parent=Dca43.1
scaffold1	Augustus	exon	446172	446230	.	-	.	ID=Dca43.1.exon8;Parent=Dca43.1