Carnation DB

Dca4300.1

Annotation

7-exons
f-1
sp|F6GVD5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0021g00980#GO:0005488;GO:0016070#1F1P0C
Repeat List (scaffold116)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4300.1	1	194	373	23.86	194	44	2e-24
Target_name	Start	End	Length	Cov(%)
sp\|F6GVD5_VITVI	1	196	1712	11.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4300.1	1	195	373	19.83	195	36	1e-12
Target_name	Start	End	Length	Cov(%)
AT3G60240.4	1	193	1727	11.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold116	Augustus	mRNA	21900	25664	.	+	.	ID=Dca4300.1;Parent=Dca4300
scaffold116	Augustus	exon	21900	22081	.	+	.	ID=Dca4300.1.exon1;Parent=Dca4300.1
scaffold116	Augustus	exon	22379	22515	.	+	.	ID=Dca4300.1.exon2;Parent=Dca4300.1
scaffold116	Augustus	exon	22641	22787	.	+	.	ID=Dca4300.1.exon3;Parent=Dca4300.1
scaffold116	Augustus	exon	23118	23176	.	+	.	ID=Dca4300.1.exon4;Parent=Dca4300.1
scaffold116	Augustus	exon	23268	23324	.	+	.	ID=Dca4300.1.exon5;Parent=Dca4300.1
scaffold116	Augustus	exon	25015	25479	.	+	.	ID=Dca4300.1.exon6;Parent=Dca4300.1
scaffold116	Augustus	exon	25590	25664	.	+	.	ID=Dca4300.1.exon7;Parent=Dca4300.1