Carnation DB

Dca43194.1

Annotation

8-exons
f-1
sp|B9HCF8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1080142#GO:0005634;GO:0003824;GO:0003677;GO:0045893;GO:0006367#2F2P1C
sp|B9S068_RICCO#Tfiif-alpha, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1299530#GO:0005634;GO:0003824;GO:0003677;GO:0045893;GO:0006367#2F2P1C
Repeat List (scaffold49)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43194.1	52	549	550	61.45	498	66	2e-151
Target_name	Start	End	Length	Cov(%)
sp\|B9HCF8_POPTR	50	538	541	90.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43194.1	62	549	550	52.18	488	58	2e-132
Target_name	Start	End	Length	Cov(%)
Os10t0188100-03	59	525	530	88.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold49	Augustus	mRNA	373368	377860	.	-	.	ID=Dca43194.1;Parent=Dca43194
scaffold49	Augustus	exon	373368	373454	.	-	.	ID=Dca43194.1.exon1;Parent=Dca43194.1
scaffold49	Augustus	exon	373692	373895	.	-	.	ID=Dca43194.1.exon2;Parent=Dca43194.1
scaffold49	Augustus	exon	373996	374193	.	-	.	ID=Dca43194.1.exon3;Parent=Dca43194.1
scaffold49	Augustus	exon	374295	374474	.	-	.	ID=Dca43194.1.exon4;Parent=Dca43194.1
scaffold49	Augustus	exon	374587	374705	.	-	.	ID=Dca43194.1.exon5;Parent=Dca43194.1
scaffold49	Augustus	exon	375449	375825	.	-	.	ID=Dca43194.1.exon6;Parent=Dca43194.1
scaffold49	Augustus	exon	375917	376221	.	-	.	ID=Dca43194.1.exon7;Parent=Dca43194.1
scaffold49	Augustus	exon	377678	377860	.	-	.	ID=Dca43194.1.exon8;Parent=Dca43194.1