Dca43215.1
Annotation
- 4-exons
- f-1
- sp|B9SJ37_RICCO#E3 ubiquitin ligase PUB14, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0842310#GO:0000151;GO:0005488;GO:0004842#2F0P1C
- Repeat List (scaffold4900)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43215.1 |
9 |
631 |
632 |
65.18 |
623 |
64 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9SJ37_RICCO |
17 |
648 |
648 |
97.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43215.1 |
33 |
627 |
632 |
59.01 |
595 |
62 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G71020.1 |
26 |
620 |
628 |
94.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4900 |
Augustus |
mRNA |
10223 |
13732 |
. |
- |
. |
ID=Dca43215.1;Parent=Dca43215 |
| scaffold4900 |
Augustus |
exon |
10223 |
11296 |
. |
- |
. |
ID=Dca43215.1.exon1;Parent=Dca43215.1 |
| scaffold4900 |
Augustus |
exon |
11459 |
11875 |
. |
- |
. |
ID=Dca43215.1.exon2;Parent=Dca43215.1 |
| scaffold4900 |
Augustus |
exon |
11954 |
12070 |
. |
- |
. |
ID=Dca43215.1.exon3;Parent=Dca43215.1 |
| scaffold4900 |
Augustus |
exon |
13442 |
13732 |
. |
- |
. |
ID=Dca43215.1.exon4;Parent=Dca43215.1 |
