Carnation DB

Dca43377.1

Annotation

9-exons
f-1
sp|D7TNB9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0026g01910#GO:0005634;GO:0003677;GO:0006355#1F1P1C
sp|D9ZJ68_MALDO#MYB domain class transcription factor#Malus domestica (Apple) (Pyrus malus)#Name=MYB88#GO:0005634;GO:0003677;GO:0006355#1F1P1C
Repeat List (scaffold4933)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43377.1	2	366	392	55.1	365	55	2e-108
Target_name	Start	End	Length	Cov(%)
sp\|D7TNB9_VITVI	85	480	481	82.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43377.1	2	366	392	50	365	53	3e-94
Target_name	Start	End	Length	Cov(%)
AT1G14350.1	90	435	436	79.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4933	Augustus	mRNA	12668	15533	.	+	.	ID=Dca43377.1;Parent=Dca43377
scaffold4933	Augustus	exon	12668	12729	.	+	.	ID=Dca43377.1.exon1;Parent=Dca43377.1
scaffold4933	Augustus	exon	12873	13052	.	+	.	ID=Dca43377.1.exon2;Parent=Dca43377.1
scaffold4933	Augustus	exon	13137	13306	.	+	.	ID=Dca43377.1.exon3;Parent=Dca43377.1
scaffold4933	Augustus	exon	13395	13537	.	+	.	ID=Dca43377.1.exon4;Parent=Dca43377.1
scaffold4933	Augustus	exon	13659	13801	.	+	.	ID=Dca43377.1.exon5;Parent=Dca43377.1
scaffold4933	Augustus	exon	14091	14305	.	+	.	ID=Dca43377.1.exon6;Parent=Dca43377.1
scaffold4933	Augustus	exon	14751	14830	.	+	.	ID=Dca43377.1.exon7;Parent=Dca43377.1
scaffold4933	Augustus	exon	15243	15345	.	+	.	ID=Dca43377.1.exon8;Parent=Dca43377.1
scaffold4933	Augustus	exon	15451	15533	.	+	.	ID=Dca43377.1.exon9;Parent=Dca43377.1