Carnation DB

Dca43411.1

Annotation

23-exons
f-1
sp|D7TJH8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g00810#GO:0005524;GO:0008026;GO:0003676#3F0P0C
Os01t0212100-01 DEAD-like helicase, N-terminal domain containing protein.
Repeat List (scaffold4940)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43411.1	1	737	742	69.67	737	68	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TJH8_VITVI	1	693	694	99.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43411.1	1	739	742	67.52	739	66	0
Target_name	Start	End	Length	Cov(%)
Os01t0212100-01	1	700	701	99.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4940	Augustus	mRNA	10946	20669	.	-	.	ID=Dca43411.1;Parent=Dca43411
scaffold4940	Augustus	exon	10946	11099	.	-	.	ID=Dca43411.1.exon1;Parent=Dca43411.1
scaffold4940	Augustus	exon	11680	11759	.	-	.	ID=Dca43411.1.exon2;Parent=Dca43411.1
scaffold4940	Augustus	exon	11852	11905	.	-	.	ID=Dca43411.1.exon3;Parent=Dca43411.1
scaffold4940	Augustus	exon	12120	12206	.	-	.	ID=Dca43411.1.exon4;Parent=Dca43411.1
scaffold4940	Augustus	exon	12377	12475	.	-	.	ID=Dca43411.1.exon5;Parent=Dca43411.1
scaffold4940	Augustus	exon	13344	13433	.	-	.	ID=Dca43411.1.exon6;Parent=Dca43411.1
scaffold4940	Augustus	exon	13921	14145	.	-	.	ID=Dca43411.1.exon7;Parent=Dca43411.1
scaffold4940	Augustus	exon	14525	14615	.	-	.	ID=Dca43411.1.exon8;Parent=Dca43411.1
scaffold4940	Augustus	exon	15021	15121	.	-	.	ID=Dca43411.1.exon9;Parent=Dca43411.1
scaffold4940	Augustus	exon	15779	15832	.	-	.	ID=Dca43411.1.exon10;Parent=Dca43411.1
scaffold4940	Augustus	exon	15911	15994	.	-	.	ID=Dca43411.1.exon11;Parent=Dca43411.1
scaffold4940	Augustus	exon	16090	16136	.	-	.	ID=Dca43411.1.exon12;Parent=Dca43411.1
scaffold4940	Augustus	exon	16272	16377	.	-	.	ID=Dca43411.1.exon13;Parent=Dca43411.1
scaffold4940	Augustus	exon	16968	17063	.	-	.	ID=Dca43411.1.exon14;Parent=Dca43411.1
scaffold4940	Augustus	exon	17163	17232	.	-	.	ID=Dca43411.1.exon15;Parent=Dca43411.1
scaffold4940	Augustus	exon	17412	17497	.	-	.	ID=Dca43411.1.exon16;Parent=Dca43411.1
scaffold4940	Augustus	exon	17590	17659	.	-	.	ID=Dca43411.1.exon17;Parent=Dca43411.1
scaffold4940	Augustus	exon	18045	18129	.	-	.	ID=Dca43411.1.exon18;Parent=Dca43411.1
scaffold4940	Augustus	exon	18536	18602	.	-	.	ID=Dca43411.1.exon19;Parent=Dca43411.1
scaffold4940	Augustus	exon	18712	18801	.	-	.	ID=Dca43411.1.exon20;Parent=Dca43411.1
scaffold4940	Augustus	exon	19212	19286	.	-	.	ID=Dca43411.1.exon21;Parent=Dca43411.1
scaffold4940	Augustus	exon	19504	19578	.	-	.	ID=Dca43411.1.exon22;Parent=Dca43411.1
scaffold4940	Augustus	exon	20427	20669	.	-	.	ID=Dca43411.1.exon23;Parent=Dca43411.1