Carnation DB

Dca43503.1

Annotation

7-exons
f-1
sp|A5AUR5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_015273#GO:0003676;GO:0015074#1F1P0C
AT2G25280.1 | Symbols: | CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related (InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins in 474 species: Archae - 213; Bacteria - 366; Metazoa - 159; Fungi - 135; Plants - 54; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink). | chr2:10762639-10764631 REVERSE LENGTH=291
Repeat List (scaffold4962)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43503.1	349	428	530	9.81	80	65	7e-26
Target_name	Start	End	Length	Cov(%)
sp\|A5AUR5_VITVI	322	401	691	11.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43503.1	161	300	530	15.66	140	36	4e-30
Target_name	Start	End	Length	Cov(%)
AT2G25280.1	5	241	291	81.44

seqname	source	feature	start	end	score	strand	frame	group
scaffold4962	Augustus	mRNA	4380	12352	.	+	.	ID=Dca43503.1;Parent=Dca43503
scaffold4962	Augustus	exon	4380	4450	.	+	.	ID=Dca43503.1.exon1;Parent=Dca43503.1
scaffold4962	Augustus	exon	7310	7758	.	+	.	ID=Dca43503.1.exon2;Parent=Dca43503.1
scaffold4962	Augustus	exon	7881	8015	.	+	.	ID=Dca43503.1.exon3;Parent=Dca43503.1
scaffold4962	Augustus	exon	8306	8417	.	+	.	ID=Dca43503.1.exon4;Parent=Dca43503.1
scaffold4962	Augustus	exon	10334	10467	.	+	.	ID=Dca43503.1.exon5;Parent=Dca43503.1
scaffold4962	Augustus	exon	10571	10957	.	+	.	ID=Dca43503.1.exon6;Parent=Dca43503.1
scaffold4962	Augustus	exon	12048	12352	.	+	.	ID=Dca43503.1.exon7;Parent=Dca43503.1