Carnation DB

Dca4353.1

Annotation

18-exons
f-1
sp|B9HXS9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_725677#GO:0003857;GO:0050662;GO:0000166#3F0P0C
Repeat List (scaffold1161)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4353.1	3	723	723	78.14	721	79	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HXS9_POPTR	7	726	726	99.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4353.1	3	723	723	75.79	721	77	0
Target_name	Start	End	Length	Cov(%)
AT3G06860.1	6	725	725	99.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1161	Augus-PASA	mRNA	58679	68828	.	-	.	ID=Dca4353.1;Parent=Dca4353
scaffold1161	Augus-PASA	exon	58679	58717	.	-	.	ID=Dca4353.1.exon1;Parent=Dca4353.1
scaffold1161	Augus-PASA	exon	60393	60531	.	-	.	ID=Dca4353.1.exon2;Parent=Dca4353.1
scaffold1161	Augus-PASA	exon	60642	60790	.	-	.	ID=Dca4353.1.exon3;Parent=Dca4353.1
scaffold1161	Augus-PASA	exon	61737	61858	.	-	.	ID=Dca4353.1.exon4;Parent=Dca4353.1
scaffold1161	Augus-PASA	exon	61968	62089	.	-	.	ID=Dca4353.1.exon5;Parent=Dca4353.1
scaffold1161	Augus-PASA	exon	62173	62427	.	-	.	ID=Dca4353.1.exon6;Parent=Dca4353.1
scaffold1161	Augus-PASA	exon	62515	62678	.	-	.	ID=Dca4353.1.exon7;Parent=Dca4353.1
scaffold1161	Augus-PASA	exon	62769	62890	.	-	.	ID=Dca4353.1.exon8;Parent=Dca4353.1
scaffold1161	Augustus	exon	62984	63158	.	-	.	ID=Dca4353.1.exon9;Parent=Dca4353.1
scaffold1161	Augustus	exon	64300	64386	.	-	.	ID=Dca4353.1.exon10;Parent=Dca4353.1
scaffold1161	Augustus	exon	64524	64826	.	-	.	ID=Dca4353.1.exon11;Parent=Dca4353.1
scaffold1161	Augustus	exon	64896	64951	.	-	.	ID=Dca4353.1.exon12;Parent=Dca4353.1
scaffold1161	Augustus	exon	66624	66705	.	-	.	ID=Dca4353.1.exon13;Parent=Dca4353.1
scaffold1161	Augustus	exon	66788	66855	.	-	.	ID=Dca4353.1.exon14;Parent=Dca4353.1
scaffold1161	Augustus	exon	66999	67055	.	-	.	ID=Dca4353.1.exon15;Parent=Dca4353.1
scaffold1161	Augustus	exon	67143	67208	.	-	.	ID=Dca4353.1.exon16;Parent=Dca4353.1
scaffold1161	Augustus	exon	67311	67382	.	-	.	ID=Dca4353.1.exon17;Parent=Dca4353.1
scaffold1161	Augustus	exon	68735	68828	.	-	.	ID=Dca4353.1.exon18;Parent=Dca4353.1