Carnation DB

Dca43554.1

Annotation

5-exons
f-1
sp|B9GVG5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_711668#unknown#0F0P0C
sp|B9SIT8_RICCO#Gaba(A) receptor-associated protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0541040#GO:0004872#1F0P0C
Repeat List (scaffold4970)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43554.1	1	119	122	92.62	119	95	2e-60
Target_name	Start	End	Length	Cov(%)
sp\|B9GVG5_POPTR	1	119	122	97.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43554.1	1	117	122	87.7	117	92	4e-59
Target_name	Start	End	Length	Cov(%)
AT4G16520.1	1	117	121	96.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4970	Augustus	mRNA	7758	10989	.	+	.	ID=Dca43554.1;Parent=Dca43554
scaffold4970	Augustus	exon	7758	7794	.	+	.	ID=Dca43554.1.exon1;Parent=Dca43554.1
scaffold4970	Augus-PASA	exon	7876	7931	.	+	.	ID=Dca43554.1.exon2;Parent=Dca43554.1
scaffold4970	Augus-PASA	exon	8621	8673	.	+	.	ID=Dca43554.1.exon3;Parent=Dca43554.1
scaffold4970	Augus-PASA	exon	10570	10688	.	+	.	ID=Dca43554.1.exon4;Parent=Dca43554.1
scaffold4970	Augus-PASA	exon	10886	10989	.	+	.	ID=Dca43554.1.exon5;Parent=Dca43554.1