Dca43597.1
Annotation
- 4-exons
- f-1
- sp|D5I3E9_CUCPE#Ribosomal protein L2#Cucurbita pepo (Vegetable marrow) (Summer squash)#Name=rpl2#GO:0005739;GO:0005840;GO:0003735;GO:0006412#1F1P2C
- Repeat List (scaffold498)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43597.1 |
89 |
302 |
307 |
36.8 |
214 |
46 |
2e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D5I3E9_CUCPE |
18 |
265 |
332 |
74.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43597.1 |
89 |
302 |
307 |
33.87 |
214 |
42 |
3e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00560.1 |
17 |
266 |
349 |
71.63 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold498 |
Augustus |
mRNA |
51222 |
53723 |
. |
+ |
. |
ID=Dca43597.1;Parent=Dca43597 |
| scaffold498 |
Augustus |
exon |
51222 |
51332 |
. |
+ |
. |
ID=Dca43597.1.exon1;Parent=Dca43597.1 |
| scaffold498 |
Augustus |
exon |
52449 |
52537 |
. |
+ |
. |
ID=Dca43597.1.exon2;Parent=Dca43597.1 |
| scaffold498 |
Augus-PASA |
exon |
52656 |
52732 |
. |
+ |
. |
ID=Dca43597.1.exon3;Parent=Dca43597.1 |
| scaffold498 |
Augustus |
exon |
53077 |
53723 |
. |
+ |
. |
ID=Dca43597.1.exon4;Parent=Dca43597.1 |
