Dca43678.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4995)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43678.1 |
10 |
88 |
334 |
17.06 |
79 |
73 |
9e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
473 |
548 |
896 |
8.48 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43678.1 |
2 |
76 |
334 |
11.07 |
75 |
50 |
1e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
976 |
1050 |
1401 |
5.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4995 |
Augustus |
mRNA |
22659 |
23947 |
. |
- |
. |
ID=Dca43678.1;Parent=Dca43678 |
| scaffold4995 |
Augustus |
exon |
22659 |
23432 |
. |
- |
. |
ID=Dca43678.1.exon1;Parent=Dca43678.1 |
| scaffold4995 |
Augustus |
exon |
23717 |
23947 |
. |
- |
. |
ID=Dca43678.1.exon2;Parent=Dca43678.1 |
