Carnation DB

Dca43774.1

Annotation

6-exons
f-1
sp|B9HPN0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_875430#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
AT4G18180.1 | Symbols: | Pectin lyase-like superfamily protein | chr4:10065626-10067317 FORWARD LENGTH=414
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43774.1	28	398	399	63.4	371	69	1e-152
Target_name	Start	End	Length	Cov(%)
sp\|B9HPN0_POPTR	43	409	410	89.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43774.1	26	398	399	62.65	373	65	2e-146
Target_name	Start	End	Length	Cov(%)
AT4G18180.1	33	413	414	92.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augustus	mRNA	746477	748278	.	+	.	ID=Dca43774.1;Parent=Dca43774
scaffold5	Augustus	exon	746477	746611	.	+	.	ID=Dca43774.1.exon1;Parent=Dca43774.1
scaffold5	Augustus	exon	746704	746844	.	+	.	ID=Dca43774.1.exon2;Parent=Dca43774.1
scaffold5	Augustus	exon	746934	747110	.	+	.	ID=Dca43774.1.exon3;Parent=Dca43774.1
scaffold5	Augustus	exon	747205	747494	.	+	.	ID=Dca43774.1.exon4;Parent=Dca43774.1
scaffold5	Augustus	exon	747583	747811	.	+	.	ID=Dca43774.1.exon5;Parent=Dca43774.1
scaffold5	Augustus	exon	748051	748278	.	+	.	ID=Dca43774.1.exon6;Parent=Dca43774.1