Carnation DB

Dca43788.1

Annotation

6-exons
f-1
sp|F6HTH9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0017g00650#GO:0008686;GO:0003935;GO:0009231#2F1P0C
AT5G64300.1 | Symbols: ATGCH, GCH, ATRIBA1, RFD1 | GTP cyclohydrolase II | chr5:25718459-25720790 FORWARD LENGTH=543
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43788.1	1	502	511	78.66	502	79	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HTH9_VITVI	45	551	559	90.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43788.1	17	492	511	74.36	476	80	0
Target_name	Start	End	Length	Cov(%)
AT5G64300.1	54	528	543	87.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augus-PASA	mRNA	852254	855102	.	-	.	ID=Dca43788.1;Parent=Dca43788
scaffold5	Augus-PASA	exon	852254	852499	.	-	.	ID=Dca43788.1.exon1;Parent=Dca43788.1
scaffold5	Augus-PASA	exon	852868	853164	.	-	.	ID=Dca43788.1.exon2;Parent=Dca43788.1
scaffold5	Augus-PASA	exon	853255	853384	.	-	.	ID=Dca43788.1.exon3;Parent=Dca43788.1
scaffold5	Augustus	exon	853487	853809	.	-	.	ID=Dca43788.1.exon4;Parent=Dca43788.1
scaffold5	Augustus	exon	854011	854232	.	-	.	ID=Dca43788.1.exon5;Parent=Dca43788.1
scaffold5	Augustus	exon	854785	855102	.	-	.	ID=Dca43788.1.exon6;Parent=Dca43788.1