Carnation DB

Dca43801.1

Annotation

7-exons
f-1
sp|D7SYM8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0109g00360#GO:0009707;GO:0005525;GO:0015450;GO:0006886#2F1P1C
AT5G05000.2 | Symbols: TOC34, ATTOC34, OEP34 | translocon at the outer envelope membrane of chloroplasts 34 | chr5:1474262-1475772 REVERSE LENGTH=313
Repeat List (scaffold5)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43801.1	12	313	321	70.09	302	75	9e-130
Target_name	Start	End	Length	Cov(%)
sp\|D7SYM8_VITVI	1	303	310	97.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43801.1	11	321	321	63.55	311	66	2e-120
Target_name	Start	End	Length	Cov(%)
AT5G05000.2	1	312	313	99.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5	Augustus	mRNA	976211	978381	.	+	.	ID=Dca43801.1;Parent=Dca43801
scaffold5	Augustus	exon	976211	976342	.	+	.	ID=Dca43801.1.exon1;Parent=Dca43801.1
scaffold5	Augus-PASA	exon	976463	976570	.	+	.	ID=Dca43801.1.exon2;Parent=Dca43801.1
scaffold5	Augus-PASA	exon	976932	977056	.	+	.	ID=Dca43801.1.exon3;Parent=Dca43801.1
scaffold5	Augus-PASA	exon	977318	977582	.	+	.	ID=Dca43801.1.exon4;Parent=Dca43801.1
scaffold5	Augus-PASA	exon	977692	977760	.	+	.	ID=Dca43801.1.exon5;Parent=Dca43801.1
scaffold5	Augus-PASA	exon	977944	978105	.	+	.	ID=Dca43801.1.exon6;Parent=Dca43801.1
scaffold5	Augus-PASA	exon	978277	978381	.	+	.	ID=Dca43801.1.exon7;Parent=Dca43801.1