Carnation DB

Dca43862.1

Annotation

5-exons
f-1
sp|D7TVL5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g02080#GO:0016021;GO:0005886;GO:0008643#0F1P2C
Os02t0301100-01 RAG1-activating protein 1 homologue domain containing protein.
Repeat List (scaffold50)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43862.1	1	236	253	59.28	236	64	4e-83
Target_name	Start	End	Length	Cov(%)
sp\|D7TVL5_VITVI	1	233	260	89.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43862.1	1	227	253	54.94	227	62	6e-69
Target_name	Start	End	Length	Cov(%)
Os02t0301100-01	1	227	260	87.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold50	Augustus	mRNA	310783	312277	.	-	.	ID=Dca43862.1;Parent=Dca43862
scaffold50	Augustus	exon	310783	310965	.	-	.	ID=Dca43862.1.exon1;Parent=Dca43862.1
scaffold50	Augustus	exon	311317	311436	.	-	.	ID=Dca43862.1.exon2;Parent=Dca43862.1
scaffold50	Augustus	exon	311609	311987	.	-	.	ID=Dca43862.1.exon3;Parent=Dca43862.1
scaffold50	Augustus	exon	312118	312154	.	-	.	ID=Dca43862.1.exon4;Parent=Dca43862.1
scaffold50	Augustus	exon	312235	312277	.	-	.	ID=Dca43862.1.exon5;Parent=Dca43862.1