Dca43868.1
Annotation
- 3-exons
- f-1
- sp|Q9C8F4_ARATH#Ty1/copia-element polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T15P17.15#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold50)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43868.1 |
12 |
285 |
379 |
28.23 |
274 |
38 |
3e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9C8F4_ARATH |
21 |
293 |
1152 |
23.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43868.1 |
19 |
218 |
379 |
17.94 |
200 |
33 |
5e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
26 |
225 |
237 |
84.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold50 |
Augustus |
mRNA |
358174 |
359740 |
. |
+ |
. |
ID=Dca43868.1;Parent=Dca43868 |
| scaffold50 |
Augustus |
exon |
358174 |
359076 |
. |
+ |
. |
ID=Dca43868.1.exon1;Parent=Dca43868.1 |
| scaffold50 |
Augustus |
exon |
359334 |
359396 |
. |
+ |
. |
ID=Dca43868.1.exon2;Parent=Dca43868.1 |
| scaffold50 |
Augustus |
exon |
359567 |
359740 |
. |
+ |
. |
ID=Dca43868.1.exon3;Parent=Dca43868.1 |
