Carnation DB

Dca43878.1

Annotation

21-exons
f-1
sp|B9HNH0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_557695#GO:0005096;GO:0007165#1F1P0C
Os07t0658300-01 RhoGAP domain containing protein.
Repeat List (scaffold500)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43878.1	1	810	810	77.4	810	75	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HNH0_POPTR	40	872	872	95.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43878.1	1	810	810	66.17	810	65	0
Target_name	Start	End	Length	Cov(%)
Os07t0658300-01	58	868	872	93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold500	Augustus	mRNA	25794	35062	.	-	.	ID=Dca43878.1;Parent=Dca43878
scaffold500	Augustus	exon	25794	25982	.	-	.	ID=Dca43878.1.exon1;Parent=Dca43878.1
scaffold500	Augustus	exon	26507	26710	.	-	.	ID=Dca43878.1.exon2;Parent=Dca43878.1
scaffold500	Augustus	exon	26980	27049	.	-	.	ID=Dca43878.1.exon3;Parent=Dca43878.1
scaffold500	Augustus	exon	27789	27925	.	-	.	ID=Dca43878.1.exon4;Parent=Dca43878.1
scaffold500	Augustus	exon	28088	28201	.	-	.	ID=Dca43878.1.exon5;Parent=Dca43878.1
scaffold500	Augustus	exon	28421	28504	.	-	.	ID=Dca43878.1.exon6;Parent=Dca43878.1
scaffold500	Augustus	exon	28594	28654	.	-	.	ID=Dca43878.1.exon7;Parent=Dca43878.1
scaffold500	Augustus	exon	28746	28795	.	-	.	ID=Dca43878.1.exon8;Parent=Dca43878.1
scaffold500	Augustus	exon	29327	29668	.	-	.	ID=Dca43878.1.exon9;Parent=Dca43878.1
scaffold500	Augustus	exon	29850	30068	.	-	.	ID=Dca43878.1.exon10;Parent=Dca43878.1
scaffold500	Augustus	exon	30401	30644	.	-	.	ID=Dca43878.1.exon11;Parent=Dca43878.1
scaffold500	Augustus	exon	30904	30991	.	-	.	ID=Dca43878.1.exon12;Parent=Dca43878.1
scaffold500	Augustus	exon	31441	31510	.	-	.	ID=Dca43878.1.exon13;Parent=Dca43878.1
scaffold500	Augustus	exon	31591	31646	.	-	.	ID=Dca43878.1.exon14;Parent=Dca43878.1
scaffold500	Augustus	exon	31762	31839	.	-	.	ID=Dca43878.1.exon15;Parent=Dca43878.1
scaffold500	Augustus	exon	32120	32239	.	-	.	ID=Dca43878.1.exon16;Parent=Dca43878.1
scaffold500	Augustus	exon	32596	32710	.	-	.	ID=Dca43878.1.exon17;Parent=Dca43878.1
scaffold500	Augustus	exon	32876	32954	.	-	.	ID=Dca43878.1.exon18;Parent=Dca43878.1
scaffold500	Augustus	exon	33038	33108	.	-	.	ID=Dca43878.1.exon19;Parent=Dca43878.1
scaffold500	Augustus	exon	33300	33330	.	-	.	ID=Dca43878.1.exon20;Parent=Dca43878.1
scaffold500	Augustus	exon	35052	35062	.	-	.	ID=Dca43878.1.exon21;Parent=Dca43878.1