Carnation DB

Dca43968.1

Annotation

8-exons
f-1
sp|D7TMH7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g03300#GO:0043169;GO:0004553;GO:0005975#2F1P0C
sp|B9SWP3_RICCO#Glucan endo-1,3-beta-glucosidase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0498440#GO:0043169;GO:0042973;GO:0005975#2F1P0C
Repeat List (scaffold5017)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43968.1	19	345	372	53.22	327	59	5e-110
Target_name	Start	End	Length	Cov(%)
sp\|D7TMH7_VITVI	26	362	384	87.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43968.1	39	350	372	45.69	312	54	7e-94
Target_name	Start	End	Length	Cov(%)
AT3G55780.1	48	365	429	74.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5017	Augustus	mRNA	15779	21154	.	+	.	ID=Dca43968.1;Parent=Dca43968
scaffold5017	Augustus	exon	15779	16807	.	+	.	ID=Dca43968.1.exon1;Parent=Dca43968.1
scaffold5017	Augustus	exon	16887	16975	.	+	.	ID=Dca43968.1.exon2;Parent=Dca43968.1
scaffold5017	Augustus	exon	18005	18048	.	+	.	ID=Dca43968.1.exon3;Parent=Dca43968.1
scaffold5017	Augustus	exon	18392	18603	.	+	.	ID=Dca43968.1.exon4;Parent=Dca43968.1
scaffold5017	Augustus	exon	19720	19866	.	+	.	ID=Dca43968.1.exon5;Parent=Dca43968.1
scaffold5017	Augustus	exon	19985	20044	.	+	.	ID=Dca43968.1.exon6;Parent=Dca43968.1
scaffold5017	Augustus	exon	20887	21050	.	+	.	ID=Dca43968.1.exon7;Parent=Dca43968.1
scaffold5017	Augustus	exon	21124	21154	.	+	.	ID=Dca43968.1.exon8;Parent=Dca43968.1