Carnation DB

Dca43998.1

Annotation

7-exons
f-1
sp|A9PAQ9_POPTR#Peptidyl-prolyl cis-trans isomerase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_723047#GO:0003755;GO:0006457#1F1P0C
Repeat List (scaffold5021)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43998.1	1	207	207	83.57	207	84	2e-102
Target_name	Start	End	Length	Cov(%)
sp\|A9PAQ9_POPTR	1	207	207	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43998.1	10	207	207	81.64	198	86	4e-97
Target_name	Start	End	Length	Cov(%)
Os06t0708500-02	23	220	221	89.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5021	Augus-PASA	mRNA	6313	8899	.	-	.	ID=Dca43998.1;Parent=Dca43998
scaffold5021	Augus-PASA	exon	6313	6451	.	-	.	ID=Dca43998.1.exon1;Parent=Dca43998.1
scaffold5021	Augus-PASA	exon	7177	7252	.	-	.	ID=Dca43998.1.exon2;Parent=Dca43998.1
scaffold5021	Augus-PASA	exon	7340	7522	.	-	.	ID=Dca43998.1.exon3;Parent=Dca43998.1
scaffold5021	Augus-PASA	exon	7748	7771	.	-	.	ID=Dca43998.1.exon4;Parent=Dca43998.1
scaffold5021	Augus-PASA	exon	7885	7932	.	-	.	ID=Dca43998.1.exon5;Parent=Dca43998.1
scaffold5021	Augus-PASA	exon	8440	8518	.	-	.	ID=Dca43998.1.exon6;Parent=Dca43998.1
scaffold5021	Augus-PASA	exon	8825	8899	.	-	.	ID=Dca43998.1.exon7;Parent=Dca43998.1