Carnation DB

Dca44002.1

Annotation

12-exons
f-1
sp|D7U382_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g04440#GO:0000166#1F0P0C
AT2G20360.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr2:8786070-8789098 FORWARD LENGTH=402
Repeat List (scaffold5022)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44002.1	1	372	372	76.88	372	77	1e-167
Target_name	Start	End	Length	Cov(%)
sp\|D7U382_VITVI	1	372	399	93.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44002.1	1	372	372	73.92	372	74	1e-156
Target_name	Start	End	Length	Cov(%)
AT2G20360.1	1	375	402	93.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5022	Augustus	mRNA	3298	12387	.	-	.	ID=Dca44002.1;Parent=Dca44002
scaffold5022	Augustus	exon	3298	3356	.	-	.	ID=Dca44002.1.exon1;Parent=Dca44002.1
scaffold5022	Augustus	exon	3457	3577	.	-	.	ID=Dca44002.1.exon2;Parent=Dca44002.1
scaffold5022	Augustus	exon	7676	7744	.	-	.	ID=Dca44002.1.exon3;Parent=Dca44002.1
scaffold5022	Augustus	exon	7829	7952	.	-	.	ID=Dca44002.1.exon4;Parent=Dca44002.1
scaffold5022	Augustus	exon	8086	8201	.	-	.	ID=Dca44002.1.exon5;Parent=Dca44002.1
scaffold5022	Augustus	exon	9036	9167	.	-	.	ID=Dca44002.1.exon6;Parent=Dca44002.1
scaffold5022	Augustus	exon	9738	9808	.	-	.	ID=Dca44002.1.exon7;Parent=Dca44002.1
scaffold5022	Augustus	exon	9898	9982	.	-	.	ID=Dca44002.1.exon8;Parent=Dca44002.1
scaffold5022	Augustus	exon	10362	10447	.	-	.	ID=Dca44002.1.exon9;Parent=Dca44002.1
scaffold5022	Augustus	exon	10641	10705	.	-	.	ID=Dca44002.1.exon10;Parent=Dca44002.1
scaffold5022	Augustus	exon	12109	12214	.	-	.	ID=Dca44002.1.exon11;Parent=Dca44002.1
scaffold5022	Augustus	exon	12303	12387	.	-	.	ID=Dca44002.1.exon12;Parent=Dca44002.1
scaffold5022	Augustus	mRNA	6289	12387	.	-	.	ID=Dca44002.2;Parent=Dca44002
scaffold5022	Augustus	exon	6289	6428	.	-	.	ID=Dca44002.2.exon1;Parent=Dca44002.2
scaffold5022	Augustus	exon	6529	6649	.	-	.	ID=Dca44002.2.exon2;Parent=Dca44002.2
scaffold5022	Augustus	exon	7676	7744	.	-	.	ID=Dca44002.2.exon3;Parent=Dca44002.2
scaffold5022	Augustus	exon	7829	7952	.	-	.	ID=Dca44002.2.exon4;Parent=Dca44002.2
scaffold5022	Augustus	exon	8086	8201	.	-	.	ID=Dca44002.2.exon5;Parent=Dca44002.2
scaffold5022	Augustus	exon	9036	9167	.	-	.	ID=Dca44002.2.exon6;Parent=Dca44002.2
scaffold5022	Augustus	exon	9738	9808	.	-	.	ID=Dca44002.2.exon7;Parent=Dca44002.2
scaffold5022	Augustus	exon	9898	9982	.	-	.	ID=Dca44002.2.exon8;Parent=Dca44002.2
scaffold5022	Augustus	exon	10362	10447	.	-	.	ID=Dca44002.2.exon9;Parent=Dca44002.2
scaffold5022	Augustus	exon	10641	10705	.	-	.	ID=Dca44002.2.exon10;Parent=Dca44002.2
scaffold5022	Augustus	exon	12109	12214	.	-	.	ID=Dca44002.2.exon11;Parent=Dca44002.2
scaffold5022	Augustus	exon	12303	12387	.	-	.	ID=Dca44002.2.exon12;Parent=Dca44002.2